Int J Stomatol ›› 2019, Vol. 46 ›› Issue (5): 532-539.doi: 10.7518/gjkq.2019052

• Original Articles • Previous Articles     Next Articles

Shift of microbial composition of peri-implant gingival crevicular fluid as revealed by 16S ribosomal DNA high-throughput sequencing

Qing Wei1,Huang Lijuan1,Zheng Jiajun1,Ren Jing1,Li Chenglong2,Tuo Qiang2,Ren Xiaohua3,Mu Yandong1,3()   

  1. 1. School of Stomatology, Southwest Medical University, Luzhou 646099, China
    2. School of Medicine, University of Electronic Science and Technology, Chengdu 610054, China
    3. Dept. of Stomatology, Sichuan Provincial People’s Hospital, Chengdu 610072, China
  • Received:2018-09-05 Revised:2019-04-25 Online:2019-09-01 Published:2019-09-10
  • Contact: Yandong Mu E-mail:995448060@qq.com
  • Supported by:
    This study was supported by Sichuan Science and Technology Department Project(2016TD0008);Central University Fund(A03017023801295)

Abstract:

Objective Microbes in gingival crevicular fluid are the key components of the subgingival microecosystem around implants and are closely related to implant health. Methods The microbial structure and diversity of 30 gingival crevicular bacteria were analysed by Illumina HiSeq 2500 sequencing technology. Results The Shannon indices of the peri-implantitis group were lower than those of healthy natural teeth and healthy implants (P<0.05). The bacterial communities mainly belong to Firmicutes, Proteobacteria, Fusobacteria, Bacteroidetes, Actinobacteria and 12 other phyla, and Prevotella, Treponema, Leptotrichia, Actinomyces, Streptococcus, Butyrivibrio and 491 other genera. At the phylum level, the Bacteroides was relatively high in the periimplan-titis group (P<0.05). Butyrivibrio is one of the dominant bacteria in peri-implant inflammation. The increase in isobutyric acid may be one of the factors leading to disease state. Conclusion Healthy implants exhibit abundant microbial polymorphisms, which are consistent with healthy natural teeth. When the tissues around the implants are exposed to inflammation caused by pathogenic bacteria, the abundance of related pathogens is increased, and its diversity declines.

Key words: high-throughput sequencing, peri-implantitis, microbial diversity

CLC Number: 

  • Q257

TrendMD: 

Tab 1

Characteristics of patients and clinical data"

项目 健康天然牙 健康种植体 种植体周围炎
牙位 上颌前牙 2 2 2
上颌后牙 4 4 5
下颌前牙 1 1 0
下颌后牙 3 3 3
行使功能时间/d 5.7±0.7 4.2±3.8
PD/mm 2.4±1.9 2.9±1.7 6.0±3.5
BOP 1 2 10

Fig 1

Length of distribution of raw reads"

Fig 2

Rarefaction curves of three groups"

Tab 2

Alpha diversity indices calculated for three groups"

组别 Chao 1 ACE Simpson Shannon Coverage
H 8 198.80±284.10 12 020.69±531.10 0.06±0.02 5.40±0.19 0.91±0.01
HI 8 985.73±1 494.03 13 496.45±497.50 0.06±0.02 5.47±0.21 0.91±0.01
PI 8 181.59±428.92 13 189.68±497.50 0.07±0.02 5.24±0.13 0.92±0.01
H-HI P 0.281 0.161 0.672 0.466 0.622
H-PI P 0.281 0.139 0.457 0.041* 0.645
HI-PI P 0.942 0.795 0.245 0.009* 0.424

Fig 3

Shannon indices in three groups"

Fig 4

Principal component analysis of three groups"

Fig 5

Comparison of bacterial groups in each sample at pylum level"

Fig 6

Comparison of dominant bacteria in three groups"

Fig 7

Comparison of heatmap in three groups at genus level"

Fig 8

Comparison of bacterial groups in each sample at genus level"

[1] Albrektsson T, Donos N , Working Group 1. Implant survival and complications. The Third EAO consen-sus conference 2012[J]. Clin Oral Implants Res, 2012,23(Suppl 6):63-65.
[2] Mombelli A, Lang NP . The diagnosis and treatment of peri-implantitis[J]. Periodontol 2000, 1998,17:63-76.
[3] Belibasakis GN . Microbiological and immuno-patho-logical aspects of peri-implant diseases[J]. Arch Oral Biol, 2014,59(1):66-72.
[4] Renvert S, Quirynen M . Risk indicators for peri-im-plantitis. A narrative review[J]. Clin Oral Implants Res, 2015,26(Suppl 11):15-44.
[5] Mombelli A, Müller N, Cionca N . The epidemiology of peri-implantitis[J]. Clin Oral Implants Res, 2012,23(Suppl 6):67-76.
[6] 陈新, 熊萍, 钟科 , 等. 种植体周围黏膜炎龈下微生物群落多样性研究[J]. 口腔医学研究, 2015,31(7):719-723.
Chen X, Xiong P, Zhong K , et al. Study on the diversity of subgingival microflora in implant mucositis[J]. J Oral Sic Res, 2015,31(7):719-723.
[7] Wang T, Cai G, Qiu Y , et al. Structural segregation of gut microbiota between colorectal cancer patients and healthy volunteers[J]. ISME J, 2012,6(2):320-329.
[8] 赵红, 王新林, 吕治 , 等. 基于高通量测序技术研究慢性牙周炎患者龈下刮治和根面平整术治疗前后龈下菌群的变化[J]. 国际口腔医学杂志, 2017,44(3):294-300.
Zhao H, Wang XL, Lü Z , et al. Microbiological community analysis by high-throughput sequencing of subgingival plaque in patients with chronic periodontitis before and after subgingival scaling and root planing[J]. Int J Stomatol, 2017,44(3):294-300.
[9] Persson GR, Renvert S . Cluster of bacteria associated with peri-implantitis[J]. Clin Implant Dent Relat Res, 2014,16(6):783-793.
[10] Kumar PS, Mason MR, Brooker MR , et al. Pyrosequencing reveals unique microbial signatures as-sociated with healthy and failing dental implants[J]. J Clin Periodontol, 2012,39(5):425-433.
[11] Al-Ahmad A, Muzafferiy F, Anderson AC , et al. Shift of microbial composition of peri-implantitis-associated oral biofilm as revealed by 16S rRNA gene cloning[J]. J Med Microbiol, 2018,67(3):332-340.
[12] Edgar RC . UPARSE: highly accurate OTU sequences from microbial amplicon reads[J]. Nat Methods, 2013,10(10):996-998.
[13] Kemp PF, Aller JY . Bacterial diversity in aquatic and other environments: what 16S rDNA libraries can tell us[J]. FEMS Microbiol Ecol, 2004,47(2):161-177.
[14] Schwarz F, Derks J, Monje A , et al. Peri-implantitis[J]. J Periodontol, 2018,89(6):S267-S290.
[15] Sorsa T, Hernández M, Leppilahti J , et al. Detection of gingival crevicular fluid MMP-8 levels with dif-ferent laboratory and chair-side methods[J]. Oral Dis, 2010,16(1):39-45.
[16] Frey KG, Herrera-Galeano JE, Redden CL , et al. Comparison of three next-generation sequencing platforms for metagenomic sequencing and identi-fication of pathogens in blood[J]. BMC Genomics, 2014,15:96.
[17] Koyanagi T, Sakamoto M, Takeuchi Y , et al. Compre-hensive microbiological findings in peri-implantitis and periodontitis[J]. J Clin Periodontol, 2013,40(3):218-226.
[18] 吴芳, 李俊平, 汪珍珍 , 等. 16S rRNA基因克隆文库分析比较牙周炎患者和健康人口腔唾液微生物多样性[J]. 微生物学通报, 2016,43(6):1295-1303.
doi: 10.13344/j.microbiol.china.150792
Wu F, Li JP, Wang ZZ , et al. Comparison of oral microbial diversity between periodontitis patients and healthy people by 16S rRNA gene clone library[J]. Microbiolog, 2016,43(6):1295-1303.
doi: 10.13344/j.microbiol.china.150792
[19] Allen B, Kon M, Bar-Yam Y . A new phylogenetic diversity measure generalizing the Shannon index and its application to phyllostomid bats[J]. Am Nat, 2009,174(2):236-243.
[20] Marsh PD . Microbial ecology of dental plaque and its significance in health and disease[J]. Adv Dent Res, 1994,8(2):263-271.
[21] Kumar PS, Griffen AL, Moeschberger ML , et al. Identification of candidate periodontal pathogens and beneficial species by quantitative 16S clonal analysis[J]. J Clin Microbiol, 2005,43(8):3944-3955.
[22] Preza D, Olsen I, Willumsen T , et al. Diversity and site-specificity of the oral microflora in the elderly[J]. Eur J Clin Microbiol Infect Dis, 2009,28(9):1033-1040.
[23] Shibli JA, Melo L, Ferrari DS , et al. Composition of supra- and subgingival biofilm of subjects with heal-thy and diseased implants[J]. Clin Oral Implants Res, 2008,19(10):975-982.
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